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Patent Eligibility

Section 101 Analysis

The 2019 Revised Guidance Step 2A Prong 1 and Prong 2 framework for patent eligibility — from prosecution responses to litigation invalidity challenges.

How does the 2019 USPTO Revised Guidance restructure the § 101 analysis?

The USPTO issued Revised Guidance in January 2019 that restructured how patent examiners apply § 101.

Background

  • After Alice (2014), USPTO examiners applied the Alice/Mayo two-step test inconsistently
  • Applicants complained of over-broad rejections
  • The Revised Guidance was intended to provide more structured and predictable examination

The 2019 Guidance Framework

Step 1

  • Confirm the claimed subject matter falls within one of the four statutory categories (process; machine; manufacture; composition of matter)
  • If not in any category, reject under § 101
  • If in a statutory category, proceed to Step 2A
  • STEP 2A, PRONG 1 — RECITES A JUDICIAL EXCEPTION?: ask whether the claim recites (explicitly or inherently) a law of nature
  • A natural phenomenon
  • Or an abstract idea
  • ABSTRACT IDEA GROUPS (Prong 1): (a) Mathematical concepts: mathematical relationships
  • Mathematical formulas or equations
  • Mathematical calculations
  • (b) Certain methods of organizing human activity: fundamental economic principles/practices (e.g., hedging, intermediated settlement)
  • Commercial or legal interactions (contracts, sales, legal relationships)
  • Managing personal behavior/relationships
  • (c) Mental processes: concepts performed in the human mind (observation, evaluation, judgment, opinion)
  • If the claim does NOT recite a judicial exception, it is patent-eligible — STOP
  • STEP 2A, PRONG 2 — PRACTICAL APPLICATION?: even if the claim DOES recite a judicial exception, ask whether the claim as a whole integrates the recited exception into a PRACTICAL APPLICATION

Practical Application Indicators

  • Reflects a specific, particular way of implementing or applying the exception
  • Applies the exception with or by a specific machine (not generic)
  • Results in a particular transformation or reduction of an article to a different state or thing
  • Applies the exception in some other way that imposes a meaningful limit
  • If YES to practical application, claim is patent-eligible — STOP
  • STEP 2B — SIGNIFICANTLY MORE?: if claim does NOT integrate into practical application, ask: do the additional elements (beyond the judicial exception) amount to significantly more than the exception?
  • This is the traditional Alice/Mayo Step 2 inquiry
  • If YES, eligible
  • If NO, reject under § 101.

What are the key differences between the 2019 USPTO Guidance and the courts' Alice/Mayo framework?

The USPTO guidance and court decisions diverge in important ways.

Prong 2 is the Key Addition

  • The Alice/Mayo Step 2 was a single question — 'significantly more'
  • The 2019 Guidance split this into two prongs: Prong 2 (practical application integration) and Step 2B (significantly more)
  • Prong 2 gives applicants a new argument even if their invention doesn't rise to 'significantly more' — arguing that the claim as a whole integrates the abstract concept into a practical application

Courts Are not Bound by USPTO Guidance

  • The Federal Circuit has explicitly said that it is not bound by the USPTO's Revised Guidance
  • Courts still apply the Alice/Mayo framework directly from the Supreme Court decisions
  • The practical effect: a claim may survive examination under the 2019 Guidance but still face § 101 invalidity challenges in court

Narrower Abstract Idea Definition

  • The 2019 Guidance listed specific groups of abstract ideas
  • This is narrower than the Supreme Court's approach (which has never defined abstract ideas exhaustively)
  • If a claim's abstract concept doesn't fit neatly into one of the three groups, examiners should give the applicant benefit of the doubt

Consistency in Prosecution

  • The Guidance has generally reduced the rate of § 101 rejections during prosecution
  • Applicants are more likely to get claims allowed with specific technical elements
  • The percentage of final § 101 rejections decreased after 2019

Subject Matter Eligibility Examples (SMEQ)

  • The USPTO publishes Subject Matter Eligibility Examples (SMEQ) to help examiners and applicants understand how the guidance applies to specific technology areas (AI, personalized medicine, data analytics)
  • These examples are extremely useful for prosecution strategy.

How do you respond to a § 101 rejection during USPTO prosecution?

Responding to § 101 rejections requires a structured approach addressing the USPTO's specific framework.

Initial Review

  • Confirm the rejection is properly framed: which judicial exception does the examiner identify?
  • Which step of the analysis (Prong 1, Prong 2, Step 2B) does the examiner rely on?
  • A poorly framed rejection can be challenged procedurally

Prong 2 Argument — Practical Application

  • Argue that the claim as a whole integrates the recited exception into a practical application
  • Identify a specific way the claim applies the exception with particular technical details
  • Compare to USPTO SMEQ examples where similar claims were found to integrate into a practical application
  • Show that the claim results in a particular transformation or improvement to a technological process

Step 2B Argument — Significantly More

  • Identify specific additional elements in the claim beyond the abstract idea
  • Argue these elements are not 'well-understood, routine, and conventional'
  • Cite specification support showing what makes the claimed implementation non-conventional
  • Compare to Enfish, McRO, Core Wireless — cases where technical improvements were found sufficient

Claim Amendments to Overcome § 101

  • Add specific technical elements that anchor the claim to a concrete implementation
  • Add specific hardware components (specific processors, memory configurations, network interfaces)
  • Add specific algorithmic steps that reflect a non-conventional technical approach
  • Add system claims that emphasize the specific machine configuration

Key Cases to Cite in Prosecution

  • Enfish (self-referential database table — specific technical improvement)
  • McRO (specific unconventional ordered combination — animation rules)
  • Core Wireless (specific improved UI structure)
  • SRI International (hierarchical network monitors — specific technical architecture)

Expert Declarations

  • A declaration under 37 C.F.R. § 1.132 from a technical expert can address whether the claimed elements were well-understood, routine, and conventional at the time of filing
  • Useful when the specification alone doesn't clearly establish the non-conventional nature of the claim.

How is § 101 eligibility challenged in litigation after a patent issues?

Section 101 invalidity is a powerful litigation defense but subject to important procedural rules.

District Court — § 101 as Invalidity Defense

  • Patent defendants can challenge § 101 eligibility as an invalidity defense in district court
  • Clear and convincing evidence standard applies to invalidity generally
  • § 101 eligibility is a QUESTION OF LAW — decided by the judge, not the jury
  • This means § 101 challenges can be resolved on: motion to dismiss (Rule 12(b)(6)) — if the claim is facially ineligible
  • Motion for judgment on the pleadings (Rule 12(c))
  • Summary judgment (Rule 56)

Early Case Resolution

  • Because § 101 is a question of law, it can be resolved before trial
  • Defendants routinely file early § 101 motions to dismiss in patent cases
  • Successful § 101 challenges before discovery save millions in litigation costs
  • Courts often resolve § 101 before or alongside Markman claim construction

IPR and § 101

Critical Limitation

  • 35 U.S.C. § 311(b): IPR petitions can only challenge claims based on § 102 (novelty) and § 103 (obviousness) prior art grounds
  • § 101 eligibility CANNOT be raised in IPR
  • PGR can raise § 101 (within 9 months of grant) — but § 101 is explicitly listed as a ground for PGR challenge (§ 321(b))

Ex Parte Reexamination. § 101 cannot be raised in ex parte reexamination either

The Mayhem

  • Since § 101 challenges can only be raised in district court, § 101 litigation remains in federal courts and ITC (not PTAB)
  • Costs remain high

ITC Section 337 Investigations

  • § 101 challenges can be raised in ITC investigations as a defense to exclusion orders
  • ITC has increasingly addressed § 101 in the context of software/tech patents.

What is the current state of § 101 law and potential reform?

Section 101 law remains in flux with ongoing legislative and judicial developments.

Current Landscape (2024-2026)

  • Alice and Mayo remain binding Supreme Court precedent
  • Congress has not yet passed § 101 reform legislation despite multiple attempts
  • The Federal Circuit continues to apply Alice/Mayo with inconsistent results across technology areas
  • COREPHOTONICS v.

Apple (Fed. Cir. 2023)

  • Camera control methods found eligible — emphasis on specific technical improvement to camera functionality
  • BAXALTA v.

Genentech (Fed. Cir. 2020). Antibody claims defined by function (binding to a natural target) found ineligible without structural specificity post-Amgen

Congressional Reform Proposals

  • Patent Eligibility Restoration Act (PERA): introduced 2023
  • Would eliminate all judicial exceptions
  • Replace with a specific list of excluded subject matter (mathematical formulas; mental processes; standalone data presented without technical effect)
  • Would effectively reverse Alice and Mayo
  • Has bipartisan support in some committee but not passed
  • Opposition: large tech companies argue PERA would revive troll patents

Sector-specific Impact

Biotech/diagnostics

  • Mayo/Alice remain most damaging here
  • Personalized medicine and diagnostic correlation patents difficult to obtain
  • Post-Amgen (2023) enablement further limits broad functional claims

Software

  • § 101 challenges remain common in software litigation
  • But Enfish/McRO principles allow many technical software patents to survive

Fintech

  • Still the most hostile environment for § 101
  • Fundamental economic practice claims routinely rejected

AI Patents

  • New frontier
  • Specific technical improvements to AI systems more likely eligible than 'apply AI to problem X'
  • USPTO issued AI-specific guidance

Practical Advice. Given ongoing uncertainty, draft claims to maximize § 101 defensibility while also addressing § 102, § 103, and § 112 requirements — multiple layers of protection.

Related guides

Alice v. CLS BankMayo TestAbstract IdeasEligible Subject MatterSoftware Patents